C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PTPRF interacting protein, binding protein 2 (liprin beta 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533792 PPFIBP2-003 ENSG00000166387 9606 + 11:7576408-7653760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaENST00000533792
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000533792 2.555±0.00 1.513±0.00 4.089±0.00 1.379±0.00 2.770±0.00 1.850±0.00 1.750±0.00 3.601±0.00 4.948±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000D4 CIL_0000D4_0002 CGP 11:7485388-7657127
CIL_0000DI CIL_0000DI_0002 CGP 11:7513298-7677222

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008907 IEA integrase activity
GO:0015074 IEA DNA integration
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040056 Ppfibp2-201 protein_coding Mus_musculus 0 2702
ENSMUST00000098134 Ppfibp2-202 protein_coding Mus_musculus 0 2610

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