C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase type IVA, member 2 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534330 PTP4A2P2-001 ENSG00000254481 9606 - 11:134123828-134124329 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000534330
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000534330 0.103±0.00 0.634±0.00 1.882±0.00 0.577±0.09 0.117±0.01 0.024±0.00 0.052±0.03 0.026±0.00 0.458±0.00 0.640±0.11 0.117±0.00 1.043±1.55 0.072±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004R4 CIL_0004R4_0003 CGP 11:133908564-134152001

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165853 Ptp4a2-201 protein_coding Mus_musculus 0 689
ENSMUST00000030578 Ptp4a2-001 protein_coding Mus_musculus 0 689
ENSMUST00000118834 Gm13422-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000141754 Ptp4a2-006 processed_transcript Mus_musculus 0 272

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