C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase 4a2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165853 Ptp4a2-201 ENSMUSG00000028788 10090 + 4:129820708-129850003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165853
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165853 8.971±0.43 18.595±0.66 4.003±0.00 28.718±0.00 6.868±1.84 4.690±0.00 6.962±1.02 12.873±0.62 51.958±14.19 64.939±15.10 16.834±7.67 6.580±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344035 PTP4A2-201 protein_coding Homo_sapiens 0 1943
ENST00000457805 PTP4A2-020 protein_coding Homo_sapiens 0 756
ENST00000468531 PTP4A2-007 protein_coding Homo_sapiens 0 1098
ENST00000470404 PTP4A2-006 protein_coding Homo_sapiens 0 390
ENST00000475464 PTP4A2-004 processed_transcript Homo_sapiens 6e-36 154
ENST00000484483 PTP4A2-005 retained_intron Homo_sapiens 0 427
ENST00000489313 PTP4A2-002 retained_intron Homo_sapiens 0 446
ENST00000494444 PTP4A2-003 processed_transcript Homo_sapiens 0 586
ENST00000524384 PTP4A2-013 processed_transcript Homo_sapiens 0 604
ENST00000526960 PTP4A2-014 processed_transcript Homo_sapiens 0 739
ENST00000528253 PTP4A2-015 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000528840 PTP4A2-012 processed_transcript Homo_sapiens 0 588
ENST00000529477 PTP4A2-009 processed_transcript Homo_sapiens 0 577
ENST00000532001 PTP4A2-016 nonsense_mediated_decay Homo_sapiens 0 652
ENST00000532289 PTP4A2-011 processed_transcript Homo_sapiens 0 750
ENST00000533408 PTP4A2-010 processed_transcript Homo_sapiens 0 361
ENST00000534330 PTP4A2P2-001 processed_pseudogene Homo_sapiens 0 689
ENST00000534796 PTP4A2-008 protein_coding Homo_sapiens 0 889
ENST00000546033 PTP4A1P2-001 processed_pseudogene Homo_sapiens 0 464
ENST00000590314 PTP4A2P1-001 processed_pseudogene Homo_sapiens 0 634
ENST00000602683 PTP4A2-021 protein_coding Homo_sapiens 0 606
ENST00000602725 PTP4A2-019 protein_coding Homo_sapiens 0 1677

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