C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cold shock domain containing E1, RNA-binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534699 CSDE1-009 ENSG00000009307 9606 - 1:114717957-114757982 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000534699
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000534699 46.089±0.00 38.157±0.00 10.586±0.00 30.468±14.58 52.354±34.33 34.969±22.01 9.183±0.00 37.098±0.00 12.936±0.00 45.846±18.44 25.295±15.70 123.033±36.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008584 TAS male gonad development
GO:0044822 IDA poly(A) RNA binding
GO:0070937 IDA CRD-mediated mRNA stability complex
GO:0070966 IMP nuclear-transcribed mRNA catabolic process, no-go decay

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029446 Csde1-201 protein_coding Mus_musculus 0 4015

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