C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NLR family, pyrin domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534750 NLRP6-002 ENSG00000174885 9606 + 11:278365-285359 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLungPlacentaENST00000534750
Transcript ID Bladder Brain Lung Placenta
ENST00000534750 0.106±0.00 0.084±0.00 0.178±0.00 0.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B4 CIL_0002B4_0001 CGP 11:278365-296107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005000 ISS vasopressin receptor activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007186 ISS G-protein coupled receptor signaling pathway
GO:0050727 ISS regulation of inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184560 Nlrp6-002 protein_coding Mus_musculus 0 1199
ENSMUST00000183845 Nlrp6-001 protein_coding Mus_musculus 0 1199
ENSMUST00000106045 Nlrp6-201 protein_coding Mus_musculus 0 1168
ENSMUST00000183761 Nlrp6-003 retained_intron Mus_musculus 0 414

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