C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002B4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174885-ENSG00000142102 CGP 9606 11:278365-296107
GeneTranscriptPositionBiotype
ENSG00000142102 (ATHL1)
ATH1, acid trehalase-like 1 (yeast) 		ENST00000397660 (ATHL1-008) 293679-294732 protein_coding
ENST00000409479 (ATHL1-002) 289559-295258 protein_coding
ENST00000409548 (ATHL1-004) 289138-296107 protein_coding
ENST00000409655 (ATHL1-001) 289172-295676 protein_coding
ENST00000474221 (ATHL1-003) 289135-295678 retained_intron
ENST00000476372 (ATHL1-005) 291560-295683 retained_intron
ENST00000482937 (ATHL1-007) 289920-292576 nonsense_mediated_decay
ENST00000529087 (ATHL1-006) 289178-290800 retained_intron
ENSG00000174885 (NLRP6)
NLR family, pyrin domain containing 6 		ENST00000312165 (NLRP6-001) 278570-285304 protein_coding
ENST00000527946 (NLRP6-003) 279059-279860 retained_intron
ENST00000534750 (NLRP6-002) 278365-285359 protein_coding
ENSG00000255026 (RP11-326C3.2)
 ENST00000525217 (RP11-326C3.2-001) 288086-288978 antisense
ENST00000533924 (RP11-326C3.2-003) 287305-288298 antisense
ENST00000534742 (RP11-326C3.2-002) 288038-288987 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0002B4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038745-ENSMUSG00000062031 CGP 10090 7:140920902-140947664
GeneTranscriptPositionBiotype
ENSMUSG00000038745 (Nlrp6)
NLR family, pyrin domain containing 6 		ENSMUST00000106045 (Nlrp6-201) 140920902-140928540 protein_coding
ENSMUST00000183761 (Nlrp6-003) 140922106-140922855 retained_intron
ENSMUST00000183845 (Nlrp6-001) 140920902-140929192 protein_coding
ENSMUST00000184560 (Nlrp6-002) 140921071-140927549 protein_coding
ENSMUSG00000062031 (Athl1)
ATH1, acid trehalase-like 1 (yeast) 		ENSMUST00000079403 (Athl1-001) 140941581-140947664 protein_coding
ENSMUST00000163094 (Athl1-004) 140942310-140946844 nonsense_mediated_decay
ENSMUST00000164337 (Athl1-002) 140941391-140947656 nonsense_mediated_decay
ENSMUST00000164580 (Athl1-006) 140942536-140947660 protein_coding
ENSMUST00000168084 (Athl1-005) 140941571-140943112 processed_transcript
ENSMUST00000169736 (Athl1-003) 140941566-140947658 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002B4_0001ENSG00000142102ENST00000397660ENST00000409479ENST00000409548ENST00000409655ENST00000474221ENST00000476372ENST00000482937ENST00000529087ENSG00000174885ENST00000312165ENST00000527946ENST00000534750ENSG00000255026ENST00000525217ENST00000533924ENST00000534742CIL_0002B4_0002ENSMUSG00000038745ENSMUST00000106045ENSMUST00000183761ENSMUST00000183845ENSMUST00000184560ENSMUSG00000062031ENSMUST00000079403ENSMUST00000163094ENSMUST00000164337ENSMUST00000164580ENSMUST00000168084ENSMUST00000169736
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002B4_0001ENSG00000142102ENST00000397660ENST00000409479ENST00000409548ENST00000409655ENST00000474221ENST00000476372ENST00000482937ENST00000529087ENSG00000174885ENST00000312165ENST00000534750ENSG00000255026ENST00000525217ENST00000533924ENST00000534742CIL_0002B4_0002ENSMUSG00000038745ENSMUST00000106045ENSMUST00000183761ENSMUST00000183845ENSMUST00000184560ENSMUSG00000062031ENSMUST00000079403ENSMUST00000164337ENSMUST00000164580ENSMUST00000169736
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142102 ENST00000397660 3.691±0.00 N/A N/A N/A N/A 1.172±0.00 1.786±0.00 N/A N/A N/A 2.534±0.00 59.083±0.00 2.151±0.00 N/A
ENST00000409479 0.953±0.00 N/A N/A N/A 1.901±0.00 N/A 0.564±0.00 0.159±0.00 0.663±0.43 0.767±0.00 N/A 5.376±0.00 1.463±0.32 1.808±1.20
ENST00000409548 N/A N/A N/A N/A 0.435±0.00 N/A N/A N/A 1.067±0.00 N/A N/A N/A 1.360±0.00 N/A
ENST00000409655 N/A N/A N/A N/A N/A N/A 0.314±0.00 0.627±0.00 N/A N/A N/A 12.395±9.77 0.955±0.40 2.183±1.72
ENST00000474221 0.718±0.00 N/A 0.186±0.00 0.229±0.03 1.305±0.00 1.293±0.00 0.228±0.00 5.588±0.00 N/A 0.972±0.00 0.107±0.00 1.546±1.40 0.924±0.28 2.205±1.62
ENST00000476372 1.265±0.00 7.201±0.00 N/A 0.426±0.00 1.914±0.00 1.473±0.00 0.189±0.13 7.052±0.00 N/A 9.264±0.00 N/A 3.749±2.59 0.907±0.30 0.509±0.00
ENST00000482937 N/A N/A N/A N/A N/A 0.826±0.00 N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A
ENST00000529087 N/A N/A N/A 0.901±0.00 N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A N/A
ENSG00000174885 ENST00000312165 N/A N/A N/A 0.051±0.00 0.019±0.00 0.112±0.08 0.213±0.00 N/A N/A 0.226±0.00 N/A 0.147±0.03 0.110±0.04 0.248±0.00
ENST00000527946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534750 N/A N/A 0.106±0.00 0.084±0.00 N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A 0.093±0.00 N/A
ENSG00000255026 ENST00000525217 N/A 8.064±0.00 0.070±0.00 N/A 0.451±0.13 0.355±0.00 N/A 4.192±0.00 0.519±0.00 N/A N/A 0.348±0.22 0.219±0.06 0.601±0.00
ENST00000533924 N/A 4.395±0.00 1.645±0.00 0.147±0.00 1.865±0.00 N/A N/A N/A 0.224±0.00 N/A N/A 0.248±0.00 N/A 0.861±0.00
ENST00000534742 0.379±0.00 N/A N/A N/A 0.854±0.00 0.542±0.00 N/A N/A N/A 0.959±0.00 N/A 0.351±0.00 N/A 0.775±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038745 ENSMUST00000106045 0.248±0.03 0.490±0.22 0.010±0.00 0.084±0.06 0.122±0.08 41.857±4.58 0.021±0.01 16.228±3.10 24.706±23.19 0.115±0.08 N/A 0.730±0.30 0.106±0.08 0.062±0.02
ENSMUST00000183761 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00
ENSMUST00000183845 N/A N/A N/A 0.032±0.00 0.078±0.00 14.483±1.75 0.016±0.00 10.170±1.89 15.467±0.85 0.083±0.05 N/A 0.266±0.20 0.179±0.00 0.044±0.00
ENSMUST00000184560 0.010±0.00 0.359±0.20 0.015±0.00 0.048±0.01 N/A N/A 0.009±0.00 N/A N/A 0.067±0.02 N/A 0.268±0.11 N/A 0.014±0.01
ENSMUSG00000062031 ENSMUST00000079403 18.994±1.62 29.642±5.41 14.500±1.70 3.487±0.75 17.067±2.37 18.527±3.68 2.787±0.24 22.740±3.19 11.273±6.70 13.300±2.13 0.828±0.42 20.566±7.92 1.908±1.54 0.509±0.28
ENSMUST00000163094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A 0.275±0.00 N/A
ENSMUST00000164580 N/A N/A N/A 0.996±0.00 8.094±0.00 N/A N/A N/A N/A N/A 0.866±0.00 4.575±0.00 0.287±0.14 0.077±0.00
ENSMUST00000168084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169736 6.349±0.89 5.246±0.48 6.400±1.72 1.413±0.78 5.394±0.64 5.774±1.22 1.670±0.85 3.527±0.52 3.198±0.70 6.020±0.18 0.522±0.35 7.127±2.63 1.410±0.90 0.387±0.16

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