C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP3 actin-related protein 3 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535589 ACTR3-008 ENSG00000115091 9606 + 2:113890598-113957591 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000535589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000535589 38.687±0.00 37.514±0.00 5.628±0.00 24.952±13.96 21.047±3.74 33.521±16.61 3.959±0.00 3.608±0.00 18.582±0.00 17.548±0.00 8.607±7.68 53.491±35.11 49.189±0.00 48.105±3.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WV CIL_0002WV_0002 CGP 2:113889960-115845752

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027579 Actr3-201 protein_coding Mus_musculus 0 1881
ENSMUST00000178474 Actr3-001 protein_coding Mus_musculus 0 1881
ENSMUST00000118948 Gm8822-001 processed_pseudogene Mus_musculus 0 1816
ENSMUST00000191578 Actr3-011 nonsense_mediated_decay Mus_musculus 0 1620
ENSMUST00000188497 Actr3-002 protein_coding Mus_musculus 0 939
ENSMUST00000191544 Actr3-004 protein_coding Mus_musculus 0 889
ENSMUST00000186008 Actr3-006 retained_intron Mus_musculus 0 704
ENSMUST00000187460 Actr3-003 protein_coding Mus_musculus 0 688
ENSMUST00000191004 Actr3-008 protein_coding Mus_musculus 0 680
ENSMUST00000189192 Actr3-009 retained_intron Mus_musculus 0 521
ENSMUST00000185280 Actr3-007 protein_coding Mus_musculus 0 418
ENSMUST00000128586 Gm15899-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000188362 Actr3-010 retained_intron Mus_musculus 0 326
ENSMUST00000188827 Actr3-005 retained_intron Mus_musculus 0 261

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