C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536142 TSN-201 ENSG00000211460 9606 + 2:121755545-121767853 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLungENST00000536142
Transcript ID Breast Colon Kidney Lung
ENST00000536142 2.175±0.00 0.953±0.00 1.210±0.00 1.987±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0006310 TAS DNA recombination
GO:0043565 IEA sequence-specific DNA binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186608 Tsn-003 retained_intron Mus_musculus 0 665
ENSMUST00000027623 Tsn-001 protein_coding Mus_musculus 0 514
ENSMUST00000188882 Tsn-005 retained_intron Mus_musculus 0 383
ENSMUST00000188512 Tsn-006 retained_intron Mus_musculus 0 357
ENSMUST00000189768 Tsn-002 processed_transcript Mus_musculus 0 355
ENSMUST00000186163 Tsn-004 retained_intron Mus_musculus 1e-37 163

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