C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027623 Tsn-001 ENSMUSG00000026374 10090 - 1:118294778-118311416 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027623 3.041±0.68 1.856±0.30 1.329±0.33 6.375±4.23 2.583±1.02 1.065±0.27 2.456±0.10 3.554±0.44 3.377±1.90 3.086±0.73 0.872±0.08 2.936±1.25 3.423±1.26 1.228±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003697 IEA single-stranded DNA binding
GO:0003723 IDA RNA binding
GO:0003729 IDA mRNA binding
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0032403 IEA protein complex binding
GO:0043565 IEA sequence-specific DNA binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230048 ACOT13-001 protein_coding Homo_sapiens 0.0000004 62
ENST00000389682 TSN-001 protein_coding Homo_sapiens 0 1070
ENST00000409193 TSN-007 protein_coding Homo_sapiens 0 904
ENST00000455432 TSN-008 protein_coding Homo_sapiens 0 580
ENST00000462386 IDH1-003 retained_intron Homo_sapiens 0.00003 55
ENST00000467324 TSN-002 retained_intron Homo_sapiens 0 917
ENST00000478165 TSN-011 retained_intron Homo_sapiens 0 357
ENST00000481818 TSN-006 retained_intron Homo_sapiens 2e-35 152
ENST00000483698 TSN-005 retained_intron Homo_sapiens 0 274
ENST00000490104 TSN-003 retained_intron Homo_sapiens 0 785
ENST00000490717 TSN-009 retained_intron Homo_sapiens 3e-35 152
ENST00000495112 TSN-010 processed_transcript Homo_sapiens 0 545
ENST00000498545 TSN-004 processed_transcript Homo_sapiens 0 558
ENST00000536142 TSN-201 protein_coding Homo_sapiens 0 514
ENST00000537591 ACOT13-201 protein_coding Homo_sapiens 0.0000005 62
ENST00000576180 DNAJA3-004 retained_intron Homo_sapiens 0.000003 58

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