C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proprotein convertase subtilisin/kexin type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536609 PCSK2-005 ENSG00000125851 9606 + 20:17227056-17482283 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000536609
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000536609 6.846±0.00 0.071±0.00 1.717±1.40 0.431±0.00 0.122±0.05 0.188±0.18 1.058±0.00 0.054±0.03 1.737±1.58 0.527±0.25 2.540±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DI CIL_0002DI_0001 CGP 20:16748358-17484578
CIL_0007A3 CIL_0007A3_0002 CGP 20:17226107-17569220

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IDA:IEA serine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0006508 IDA:IEA proteolysis
GO:0016020 IDA membrane
GO:0030070 IDA insulin processing
GO:0034230 ISS enkephalin processing
GO:0034231 ISS islet amyloid polypeptide processing
GO:0034774 TAS secretory granule lumen
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028905 Pcsk2-002 protein_coding Mus_musculus 0 2130
ENSMUST00000124751 Pcsk2-001 processed_transcript Mus_musculus 0 324

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