C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 20, type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536675 CDH20-201 ENSG00000101542 9606 + 18:61490542-61555132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastPlacentaTestisENST00000536675
Transcript ID Adipose Brain Breast Placenta Testis
ENST00000536675 0.143±0.00 2.042±0.95 0.442±0.00 0.031±0.01 0.118±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0001 CGP 18:61333582-61894247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062528 Cdh20-001 protein_coding Mus_musculus 0 3269

Loading