C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537175 RP11-473N11.2-001 ENSG00000256238 9606 - 12:16399274-16402406 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000537175
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000537175 0.119±0.00 0.143±0.00 0.055±0.02 0.112±0.06 0.086±0.01 0.017±0.00 0.089±0.03 0.057±0.01 0.081±0.04 0.093±0.00 0.057±0.07 0.008±0.00 0.081±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NM CIL_0007NM_0001 UCNEbase 12:16018180-18077080
CIL_00098O CIL_00098O_0001 VISTA 12:16157111-16759002
CIL_0005FD CIL_0005FD_0001 CGP 12:16188485-16609259
CIL_0009BE CIL_0009BE_0001 VISTA 12:16262381-16863426
CIL_0005FE CIL_0005FE_0001 CGP 12:16347142-16610594

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046709 Supt16-201 protein_coding Mus_musculus 0 3677
ENSDART00000105895 cacna1sa-001 protein_coding Danio_rerio 0.00006 55

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