C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caprin family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537553 CAPRIN2-006 ENSG00000110888 9606 - 12:30709552-30753659 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverOvaryPlacentaENST00000537553
Transcript ID Bladder Brain Breast Heart Kidney Liver Ovary Placenta
ENST00000537553 0.290±0.00 0.529±0.18 0.270±0.00 0.260±0.00 0.580±0.00 0.338±0.00 0.810±0.34 0.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HS CIL_0006HS_0001 CGP 12:30628988-30754951

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072324 Caprin2-003 protein_coding Mus_musculus 0 981
ENSMUST00000111569 Caprin2-001 protein_coding Mus_musculus 0 981
ENSMUST00000139914 Caprin2-006 protein_coding Mus_musculus 0 590
ENSMUST00000127941 Caprin2-008 processed_transcript Mus_musculus 0 518
ENSMUST00000151640 Caprin2-007 processed_transcript Mus_musculus 0 342
ENSMUST00000154971 Caprin2-005 processed_transcript Mus_musculus 1e-33 150

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