C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT-ROBO Rho GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537556 SRGAP1-002 ENSG00000196935 9606 + 12:63844803-64081924 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLungOvaryTestisENST00000537556
Transcript ID Bladder Breast Colon Kidney Lung Ovary Testis
ENST00000537556 0.654±0.00 1.031±0.00 1.319±0.00 0.722±0.00 0.704±0.00 0.522±0.00 0.784±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KR CIL_0002KR_0002 CGP 12:63844293-64222296

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081688 Srgap1-201 protein_coding Mus_musculus 0 1759
ENSMUST00000020322 Srgap1-001 protein_coding Mus_musculus 0 1759
ENSMUST00000162710 Srgap1-002 retained_intron Mus_musculus 0 693

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