C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: occludin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538151 OCLN-201 ENSG00000197822 9606 + 5:69504177-69558104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyMuscleOvaryPlacentaTestisENST00000538151
Transcript ID Adipose Brain Breast Kidney Muscle Ovary Placenta Testis
ENST00000538151 0.182±0.00 0.312±0.00 0.427±0.00 0.656±0.00 0.052±0.00 0.796±0.33 0.527±0.00 0.774±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000774 CIL_000774_0002 CGP 5:69415112-69558104
CIL_0005K7 CIL_0005K7_0002 CGP 5:69492292-69594723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005923 IDA tight junction
GO:0006461 TAS protein complex assembly
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0016021 IEA integral component of membrane
GO:0019904 IPI protein domain specific binding
GO:0030054 IDA cell junction
GO:0031410 IDA cytoplasmic vesicle
GO:0045216 IMP cell-cell junction organization
GO:0070830 IMP tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160859 Ocln-002 protein_coding Mus_musculus 0 1027
ENSMUST00000159459 Ocln-004 protein_coding Mus_musculus 0 1027
ENSMUST00000022140 Ocln-003 protein_coding Mus_musculus 0 1027
ENSMUST00000069756 Ocln-001 protein_coding Mus_musculus 0 1027
ENSMUST00000159515 Ocln-005 protein_coding Mus_musculus 0 416

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