C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 20, type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538374 CDH20-002 ENSG00000101542 9606 + 18:61334273-61554695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryENST00000538374
Transcript ID Adrenal Breast Colon Kidney Liver Ovary
ENST00000538374 0.027±0.00 0.134±0.00 0.056±0.00 0.022±0.00 0.120±0.00 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0001 CGP 18:61333582-61894247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062528 Cdh20-001 protein_coding Mus_musculus 0 3133

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