C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539896 PTAFR-201 ENSG00000169403 9606 - 1:28147166-28193936 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLiverLungMuscleOvaryPlacentaENST00000539896
Transcript ID Adipose Adrenal Liver Lung Muscle Ovary Placenta
ENST00000539896 1.808±0.00 0.592±0.00 0.625±0.00 2.161±0.00 0.105±0.00 1.204±0.76 3.013±0.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 TAS:IEA G-protein coupled receptor activity
GO:0004992 IDA platelet activating factor receptor activity
GO:0005543 IDA phospholipid binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006935 IEA chemotaxis
GO:0006955 TAS immune response
GO:0007186 IMP:IEA G-protein coupled receptor signaling pathway
GO:0016020 IDA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0048015 IDA phosphatidylinositol-mediated signaling
GO:0060333 TAS interferon-gamma-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070690 Ptafr-001 protein_coding Mus_musculus 0 924
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000005 62

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