C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ecotropic viral integration site 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540033 EVI5-201 ENSG00000067208 9606 - 1:92508696-92792404 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000540033
Transcript ID Adrenal Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000540033 1.392±0.00 0.816±0.00 0.794±0.23 0.922±0.00 3.127±0.00 0.927±0.00 0.973±0.00 0.610±0.09 0.241±0.00 1.884±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C9 CIL_0007C9_0002 CGP 1:92474762-92792404
CIL_0007CC CIL_0007CC_0002 CGP 1:92508696-92841924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112642 Evi5-001 protein_coding Mus_musculus 0 1901
ENSMUST00000128723 Evi5-006 protein_coding Mus_musculus 0 1888
ENSMUST00000124034 Evi5-005 protein_coding Mus_musculus 0 1709
ENSMUST00000138111 Evi5-002 protein_coding Mus_musculus 0 1663
ENSMUST00000119574 Gm16072-001 processed_pseudogene Mus_musculus 0 1498
ENSMUST00000132482 Evi5-003 processed_transcript Mus_musculus 0 1389
ENSMUST00000155897 Evi5-007 retained_intron Mus_musculus 0 1186
ENSMUST00000155955 Evi5-009 protein_coding Mus_musculus 0 909
ENSMUST00000136677 Evi5-013 retained_intron Mus_musculus 0 795
ENSMUST00000141673 Evi5-011 retained_intron Mus_musculus 0 544
ENSMUST00000161584 Gm15900-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000127579 Evi5-010 processed_transcript Mus_musculus 0 418
ENSMUST00000124590 Evi5-012 retained_intron Mus_musculus 0 333
ENSMUST00000132406 Evi5-004 processed_transcript Mus_musculus 0.0000000000006 82
ENSMUST00000133411 Evi5-008 processed_transcript Mus_musculus 0.000000000008 79
ENSMUST00000106107 Rab40b-001 protein_coding Mus_musculus 0.00001 58

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