C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm antigen with calponin homology and coiled-coil domains 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541492 SPECC1L-006 ENSG00000100014 9606 + 22:24270883-24414773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungOvaryENST00000541492
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Ovary
ENST00000541492 2.523±0.00 4.056±0.00 2.169±0.00 3.210±0.00 1.541±0.19 3.794±0.00 4.446±0.00 2.968±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Z1 CIL_0006Z1_0002 CGP 22:24270817-24442356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005921 IEA gap junction
GO:0007049 IEA cell cycle
GO:0046983 IEA protein dimerization activity
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105421 Specc1l-202 protein_coding Mus_musculus 0 3843
ENSMUST00000040105 Specc1l-201 protein_coding Mus_musculus 0 3766

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