C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase B domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541618 PLBD1-002 ENSG00000121316 9606 - 12:14511511-14567728 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENST00000541618
Transcript ID Brain Kidney
ENST00000541618 0.545±0.26 10.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096F CIL_00096F_0001 VISTA 12:13956439-14558986
CIL_00082T CIL_00082T_0001 VISTA 12:13957329-14561410
CIL_0003H6 CIL_0003H6_0001 CGP 12:14365632-14568349
CIL_0003HC CIL_0003HC_0001 CGP 12:14503661-14696585

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137139 Plbd1-002 retained_intron Mus_musculus 0 564
ENSMUST00000032336 Plbd1-001 protein_coding Mus_musculus 0 564
ENSMUST00000133911 Plbd1-003 retained_intron Mus_musculus 0 346

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