C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: two pore segment channel 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542467 TPCN2-003 ENSG00000162341 9606 + 11:69048961-69088203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyENST00000542467
Transcript ID Brain Colon Kidney
ENST00000542467 0.837±0.00 0.533±0.00 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SN CIL_0007SN_0001 VISTA 11:68986730-69588911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005765 IEA lysosomal membrane
GO:0006811 IEA ion transport
GO:0006939 IEA smooth muscle contraction
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport
GO:0072345 IEA NAADP-sensitive calcium-release channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058022 Tpcn2-201 protein_coding Mus_musculus 0 1116

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