C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fanconi anemia, complementation group M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542564 FANCM-003 ENSG00000187790 9606 + 14:45135954-45200028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000542564
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000542564 0.276±0.00 0.405±0.00 0.099±0.01 0.265±0.00 0.277±0.22 0.279±0.04 0.184±0.03 0.125±0.10 1.104±0.75 0.103±0.05 0.957±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q7 CIL_0005Q7_0001 CGP 14:45115600-45200890
CIL_00046X CIL_00046X_0001 CGP 14:45135940-45253540

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000712 IMP resolution of meiotic recombination intermediates
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0004386 IEA helicase activity
GO:0004518 IEA nuclease activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006281 TAS DNA repair
GO:0016787 IEA hydrolase activity
GO:0031297 IMP replication fork processing
GO:0043240 IDA Fanconi anaemia nuclear complex
GO:0071821 IDA FANCM-MHF complex
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058889 Fancm-201 protein_coding Mus_musculus 0 1435

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