C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543145 SEMA7A-002 ENSG00000138623 9606 - 15:74410316-74433955 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000543145
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000543145 0.138±0.00 7.648±5.72 0.061±0.00 0.276±0.00 0.053±0.02 0.221±0.00 0.424±0.00 2.533±2.25 0.252±0.00 1.825±0.48 12.671±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0004872 IEA receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006954 IEA inflammatory response
GO:0006955 TAS immune response
GO:0007229 IDA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0007411 TAS axon guidance
GO:0009897 ISS external side of plasma membrane
GO:0016020 IDA:IEA membrane
GO:0031225 IEA anchored component of membrane
GO:0045773 IDA positive regulation of axon extension
GO:0050727 ISS regulation of inflammatory response
GO:0060907 ISS positive regulation of macrophage cytokine production
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043059 Sema7a-201 protein_coding Mus_musculus 0 2085

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