C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544039 ABCC9-003 ENSG00000069431 9606 - 12:21805174-21910978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyMuscleOvaryPlacentaENST00000544039
Transcript ID Adipose Brain Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000544039 8.027±0.00 2.153±0.00 2.554±0.00 2.362±0.00 5.530±0.00 11.513±0.00 5.076±2.83 1.526±0.00 0.283±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PU CIL_0005PU_0001 CGP 12:21764955-21941402
CIL_0005PR CIL_0005PR_0001 CGP 12:21797401-22065674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0006813 IEA potassium ion transport
GO:0007165 IEA signal transduction
GO:0008281 IEA sulfonylurea receptor activity
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073173 Abcc9-201 protein_coding Mus_musculus 0 3943
ENSMUST00000087527 Abcc9-202 protein_coding Mus_musculus 0 2981
ENSMUST00000100827 Abcc9-203 protein_coding Mus_musculus 0 2780
ENSMUST00000111771 Abcc9-204 protein_coding Mus_musculus 0 2684

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