C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544246 PCDH9-001 ENSG00000184226 9606 - 13:66302834-67230445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungMuscleOvaryPlacentaTestisENST00000544246
Transcript ID Adipose Adrenal Brain Breast Colon Lung Muscle Ovary Placenta Testis
ENST00000544246 0.471±0.00 0.116±0.00 18.016±5.22 2.113±0.00 0.985±0.00 0.183±0.00 0.152±0.00 0.067±0.01 0.022±0.00 0.317±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HT CIL_0008HT_0001 VISTA 13:65735667-66336616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068992 Pcdh9-201 protein_coding Mus_musculus 0 4335

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