C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: HNF1 homeobox A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544413 HNF1A-025 ENSG00000135100 9606 + 12:120978749-121001269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryENST00000544413
Transcript ID Kidney Liver Ovary
ENST00000544413 3.944±0.00 5.217±0.00 8.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075Z CIL_00075Z_0002 CGP 12:120978543-121016502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA:IEA nucleus
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031535 Hnf1a-001 protein_coding Mus_musculus 0 2198
ENSMUST00000176911 Hnf1a-003 nonsense_mediated_decay Mus_musculus 0 1507
ENSMUST00000176550 Hnf1a-002 nonsense_mediated_decay Mus_musculus 0 904
ENSMUST00000184027 Hnf1a-004 retained_intron Mus_musculus 0 403

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