C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544463 RP11-436I9.3-001 ENSG00000255776 9606 + 12:9036344-9037244 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLungOvaryTestisENST00000544463
Transcript ID Adrenal Brain Breast Heart Lung Ovary Testis
ENST00000544463 0.167±0.00 0.013±0.00 0.141±0.07 0.079±0.04 0.218±0.00 0.107±0.05 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0001 VISTA 12:8543390-9149656

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022293 Vdac2-001 protein_coding Mus_musculus 0 708
ENSMUST00000172727 Vdac2-009 protein_coding Mus_musculus 0 702
ENSMUST00000173456 Vdac2-008 protein_coding Mus_musculus 0 702
ENSMUST00000153320 Vdac2-002 protein_coding Mus_musculus 0 503
ENSMUST00000132364 Vdac2-005 retained_intron Mus_musculus 0 409
ENSMUST00000130224 Vdac2-006 retained_intron Mus_musculus 0 327
ENSMUST00000142084 Vdac2-007 retained_intron Mus_musculus 7e-19 99

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