C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: polyhomeotic homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544916 PHC1-002 ENSG00000111752 9606 + 12:8914741-8939935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000544916
Transcript ID Testis
ENST00000544916 10.170±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0001 VISTA 12:8543390-9149656

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0016574 IDA histone ubiquitination
GO:0031519 IDA PcG protein complex
GO:0035102 IDA PRC1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161739 Phc1-004 protein_coding Mus_musculus 0 3747
ENSMUST00000079560 Phc1-201 protein_coding Mus_musculus 0 3707
ENSMUST00000160696 Phc1-005 protein_coding Mus_musculus 0 3707
ENSMUST00000160163 Phc1-002 nonsense_mediated_decay Mus_musculus 0 3683
ENSMUST00000159252 Phc1-006 protein_coding Mus_musculus 0 3267
ENSMUST00000112600 Phc1-203 protein_coding Mus_musculus 0 2874
ENSMUST00000081849 Phc1-202 protein_coding Mus_musculus 0 2874
ENSMUST00000161054 Phc1-001 protein_coding Mus_musculus 0 2874
ENSMUST00000161877 Phc1-003 nonsense_mediated_decay Mus_musculus 0 2501
ENSMUST00000160843 Phc1-007 protein_coding Mus_musculus 0 839
ENSMUST00000161290 Phc1-009 nonsense_mediated_decay Mus_musculus 0 521
ENSMUST00000159384 Phc1-010 protein_coding Mus_musculus 0 468
ENSMUST00000161149 Phc1-011 protein_coding Mus_musculus 0 346
ENSMUST00000159657 Phc1-012 protein_coding Mus_musculus 0 344
ENSMUST00000161210 Phc1-008 protein_coding Mus_musculus 0 337
ENSDART00000128810 phc1-201 protein_coding Danio_rerio 8e-29 134
ENSDART00000129536 phc1-202 protein_coding Danio_rerio 8e-29 134
ENSDART00000058496 phc1-001 protein_coding Danio_rerio 8e-29 134

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