C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L41 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544920 RPL41P2-001 ENSG00000256338 9606 + 15:28315651-28316059 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000544920
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000544920 0.678±0.00 1.389±0.00 0.643±0.41 0.141±0.00 0.569±0.30 0.165±0.00 1.321±0.00 0.857±0.56 1.276±0.35 0.660±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073238 Gm10076-201 protein_coding Mus_musculus 7e-36 154
ENSMUST00000176010 Rpl41-001 protein_coding Mus_musculus 2e-35 152
ENSMUST00000176683 Rpl41-003 protein_coding Mus_musculus 4e-33 145
ENSMUST00000177163 Rpl41-002 protein_coding Mus_musculus 2e-30 135
ENSMUST00000086236 Gm10180-201 processed_pseudogene Mus_musculus 2e-26 122
ENSMUST00000179668 Gm10736-201 processed_pseudogene Mus_musculus 2e-26 122
ENSMUST00000178135 Gm3699-201 processed_pseudogene Mus_musculus 2e-26 122
ENSMUST00000176184 Rpl41-004 retained_intron Mus_musculus 1e-22 110
ENSMUST00000177513 Rpl41-006 retained_intron Mus_musculus 1e-22 110
ENSMUST00000176906 Rpl41-007 protein_coding Mus_musculus 0.0000000000001 81

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