C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176683 Rpl41-003 ENSMUSG00000093674 10090 - 10:128548114-128549162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176683 565.616±169.46 440.606±21.60 933.456±88.20 538.623±242.45 292.365±121.21 790.241±127.67 208.643±23.91 661.744±93.46 822.197±760.64 356.664±11.51 180.708±11.68 586.639±261.98 1041.380±492.04 426.111±80.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358888 RPL41-003 processed_transcript Homo_sapiens 3e-25 119
ENST00000438481 RP11-331N16.1-001 processed_pseudogene Homo_sapiens 8e-23 108
ENST00000484902 RPL41P1-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000501597 RPL41-001 protein_coding Homo_sapiens 5e-33 145
ENST00000536425 RPL41P5-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000544920 RPL41P2-001 processed_pseudogene Homo_sapiens 4e-33 145
ENST00000546485 RPL41-004 processed_transcript Homo_sapiens 1e-22 110
ENST00000546591 RPL41-002 protein_coding Homo_sapiens 4e-30 135
ENST00000546654 RPL41-007 processed_transcript Homo_sapiens 0.0000000000002 79
ENST00000552314 RPL41-005 processed_transcript Homo_sapiens 2e-22 110
ENST00000564755 AC002310.17-001 processed_pseudogene Homo_sapiens 5e-20 100
ENST00000582508 CTD-2031P19.4-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000616602 RPL41-201 protein_coding Homo_sapiens 3e-27 122
ENST00000617112 RPL41-202 protein_coding Homo_sapiens 3e-27 122
ENST00000623733 AC092670.1-201 pseudogene Homo_sapiens 1e-22 110
ENST00000623936 RPL41-203 protein_coding Homo_sapiens 2e-30 135
ENST00000624550 AC005480.1-201 protein_coding Homo_sapiens 2e-20 102

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