C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176010 Rpl41-001 ENSMUSG00000093674 10090 - 10:128548114-128549305 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176010 633.990±108.63 122.306±13.66 1050.386±327.21 688.384±343.34 370.839±144.59 785.479±128.73 255.935±37.70 496.092±33.59 1166.769±1125.57 476.423±4.82 137.856±13.48 860.267±336.54 472.024±381.95 524.402±204.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358888 RPL41-003 processed_transcript Homo_sapiens 3e-25 119
ENST00000438481 RP11-331N16.1-001 processed_pseudogene Homo_sapiens 8e-23 108
ENST00000484902 RPL41P1-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000501597 RPL41-001 protein_coding Homo_sapiens 3e-35 152
ENST00000536425 RPL41P5-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000544920 RPL41P2-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000546485 RPL41-004 processed_transcript Homo_sapiens 1e-22 110
ENST00000546591 RPL41-002 protein_coding Homo_sapiens 4e-30 135
ENST00000546654 RPL41-007 processed_transcript Homo_sapiens 0.0000000000002 79
ENST00000552314 RPL41-005 processed_transcript Homo_sapiens 2e-22 110
ENST00000564755 AC002310.17-001 processed_pseudogene Homo_sapiens 5e-20 100
ENST00000582508 CTD-2031P19.4-001 processed_pseudogene Homo_sapiens 3e-27 122
ENST00000616602 RPL41-201 protein_coding Homo_sapiens 3e-27 122
ENST00000617112 RPL41-202 protein_coding Homo_sapiens 3e-27 122
ENST00000623733 AC092670.1-201 pseudogene Homo_sapiens 1e-23 113
ENST00000623936 RPL41-203 protein_coding Homo_sapiens 2e-30 135
ENST00000624550 AC005480.1-201 protein_coding Homo_sapiens 2e-21 106

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