C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitination factor E4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545354 UBE4A-003 ENSG00000110344 9606 + 11:118378501-118396507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLungOvaryENST00000545354
Transcript ID Bladder Breast Kidney Lung Ovary
ENST00000545354 4.408±0.00 2.799±0.00 3.773±0.00 3.952±0.00 6.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0001 VISTA 11:118137591-118740525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0034450 IEA ubiquitin-ubiquitin ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117549 Ube4a-005 protein_coding Mus_musculus 0 2344
ENSMUST00000145657 Ube4a-001 nonsense_mediated_decay Mus_musculus 0 1736
ENSMUST00000154287 Ube4a-004 nonsense_mediated_decay Mus_musculus 0 1284
ENSMUST00000117506 Ube4a-003 protein_coding Mus_musculus 0 1123

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