C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545822 HADHB-202 ENSG00000138029 9606 + 2:26261021-26290464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000545822
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000545822 27.241±0.00 13.266±0.00 22.381±0.00 21.453±0.00 20.888±0.00 51.735±0.00 30.372±0.00 38.114±0.00 8.899±0.00 27.535±0.00 21.484±0.00 16.113±4.17 24.629±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DH CIL_0007DH_0001 CGP 2:26173091-26244726
CIL_0007DK CIL_0007DK_0001 CGP 2:26190635-26290468
CIL_0007DJ CIL_0007DJ_0001 CGP 2:26243170-26346817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003857 TAS 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003988 IEA acetyl-CoA C-acyltransferase activity
GO:0005515 IPI protein binding
GO:0005739 NAS mitochondrion
GO:0005740 TAS mitochondrial envelope
GO:0005741 IDA mitochondrial outer membrane
GO:0005743 IDA mitochondrial inner membrane
GO:0005783 IDA endoplasmic reticulum
GO:0006635 IEA fatty acid beta-oxidation
GO:0006644 TAS phospholipid metabolic process
GO:0008152 IEA metabolic process
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0035965 TAS cardiolipin acyl-chain remodeling
GO:0042645 IDA mitochondrial nucleoid
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114783 Hadhb-003 protein_coding Mus_musculus 0 1783
ENSMUST00000114786 Hadhb-002 protein_coding Mus_musculus 0 1783
ENSMUST00000026841 Hadhb-001 protein_coding Mus_musculus 0 1783
ENSMUST00000121752 Gm13910-001 processed_pseudogene Mus_musculus 0 1659
ENSMUST00000133414 Hadhb-007 processed_transcript Mus_musculus 0 442
ENSMUST00000141236 Hadhb-008 processed_transcript Mus_musculus 0 409
ENSMUST00000122934 Hadhb-006 retained_intron Mus_musculus 0 350
ENSMUST00000123980 Hadhb-005 protein_coding Mus_musculus 0 315

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