C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545955 UTY-205 ENSG00000183878 9606 - Y:13248379-13480670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverTestisENST00000545955
Transcript ID Bladder Brain Heart Liver Testis
ENST00000545955 0.302±0.00 1.120±0.00 0.699±0.00 1.651±0.00 0.353±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0002 CGP Y:12904937-13480673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0046872 IEA metal ion binding
GO:0071557 IEA histone H3-K27 demethylation
GO:0071558 IEA histone demethylase activity (H3-K27 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044484 Kdm6a-001 protein_coding Mus_musculus 0 3557
ENSMUST00000052368 Kdm6a-002 protein_coding Mus_musculus 0 3485
ENSMUST00000154004 Uty-005 protein_coding Mus_musculus 0 2109
ENSMUST00000139365 Uty-004 protein_coding Mus_musculus 0 2109
ENSMUST00000069309 Uty-001 protein_coding Mus_musculus 0 2109
ENSMUST00000154666 Uty-007 nonsense_mediated_decay Mus_musculus 0 2109
ENSMUST00000143286 Uty-008 protein_coding Mus_musculus 0 2109
ENSMUST00000130978 Kdm6a-003 retained_intron Mus_musculus 0 1733
ENSMUST00000143958 Uty-002 nonsense_mediated_decay Mus_musculus 0 1301
ENSMUST00000137048 Uty-006 protein_coding Mus_musculus 0 1153
ENSDART00000088469 kdm6a-201 protein_coding Danio_rerio 0 837
ENSDART00000144623 kdm6a-001 protein_coding Danio_rerio 0 837
ENSMUST00000157073 Uty-003 processed_transcript Mus_musculus 0 350
ENSMUST00000185837 Uty-012 retained_intron Mus_musculus 0 202
ENSMUST00000133976 Uty-009 retained_intron Mus_musculus 2e-22 113

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