C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: triadin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546248 TRDN-202 ENSG00000186439 9606 - 6:123503651-123637093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000546248
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000546248 0.092±0.00 1.286±0.00 0.632±0.00 23.720±0.00 0.293±0.00 107.412±0.00 0.091±0.00 0.261±0.00 0.029±0.00 31.560±0.00 0.853±0.00 0.044±0.00 4.467±0.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0010880 IEA regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0014070 IEA response to organic cyclic compound
GO:0014701 IEA junctional sarcoplasmic reticulum membrane
GO:0014808 IEA release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0014902 IEA myotube differentiation
GO:0016020 IEA membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0030314 IEA junctional membrane complex
GO:0031122 IEA cytoplasmic microtubule organization
GO:0034704 IEA calcium channel complex
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0051280 IEA negative regulation of release of sequestered calcium ion into cytosol
GO:0051281 IEA positive regulation of release of sequestered calcium ion into cytosol
GO:0060047 IEA heart contraction
GO:0090158 IEA endoplasmic reticulum membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095762 Trdn-201 protein_coding Mus_musculus 0 1033

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