C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-induced protein with tetratricopeptide repeats 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546318 IFIT1-201 ENSG00000185745 9606 + 10:89392546-89406486 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartOvaryTestisENST00000546318
Transcript ID Adipose Brain Colon Heart Ovary Testis
ENST00000546318 0.083±0.00 0.521±0.00 0.369±0.00 0.423±0.00 0.227±0.04 0.322±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IW CIL_0001IW_0001 CGP 10:89205629-89414557
CIL_0001IT CIL_0001IT_0001 CGP 10:89213569-89414557
CIL_0007BE CIL_0007BE_0008 CGP 10:89378056-89406486
CIL_0007BE CIL_0007BE_0007 CGP 10:89392546-89421001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IDA RNA binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0009615 IDA response to virus
GO:0019060 IDA intracellular transport of viral protein in host cell
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0032091 IDA negative regulation of protein binding
GO:0045070 IDA positive regulation of viral genome replication
GO:0045071 IMP negative regulation of viral genome replication
GO:0050689 IDA negative regulation of defense response to virus by host
GO:0051097 IDA negative regulation of helicase activity
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway
GO:0071357 IDA cellular response to type I interferon
GO:0071360 IDA cellular response to exogenous dsRNA

Homologs

No Homologs available.

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