C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS-like, estrogen-regulated, growth inhibitor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546331 RERG-004 ENSG00000134533 9606 - 12:15108607-15221417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartKidneyLiverLungMuscleOvaryTestisENST00000546331
Transcript ID Adipose Bladder Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000546331 1.789±0.00 2.676±0.00 0.774±0.00 0.613±0.00 2.700±0.00 1.413±0.00 0.360±0.00 0.314±0.00 1.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000374 CIL_000374_0001 CGP 12:14973022-15348675
CIL_000375 CIL_000375_0001 CGP 12:15107783-15597399

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 NAS:IEA small GTPase mediated signal transduction
GO:0008285 IDA negative regulation of cell proliferation
GO:0009725 IDA response to hormone
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 TAS GDP binding
GO:0030308 IDA negative regulation of cell growth
GO:0030331 NAS estrogen receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119610 Rerg-004 protein_coding Mus_musculus 0 691
ENSMUST00000032347 Rerg-002 protein_coding Mus_musculus 0 566
ENSMUST00000117919 Rerg-001 protein_coding Mus_musculus 0 566

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