C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547534 SLC25A3-015 ENSG00000075415 9606 + 12:98593686-98598073 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverLungOvaryENST00000547534
Transcript ID Bladder Colon Kidney Liver Lung Ovary
ENST00000547534 44.174±0.00 42.227±0.00 40.588±0.00 69.150±0.00 23.259±0.00 33.494±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090D CIL_00090D_0001 VISTA 12:98189717-98793261
CIL_0000VM CIL_0000VM_0002 CGP 12:98515512-98606379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076694 Slc25a3-001 protein_coding Mus_musculus 0 551
ENSMUST00000164505 Slc25a3-004 protein_coding Mus_musculus 0 503
ENSMUST00000171960 Slc25a3-006 retained_intron Mus_musculus 0 387
ENSMUST00000170810 Slc25a3-002 protein_coding Mus_musculus 0 366
ENSMUST00000121901 Gm13904-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000172442 Slc25a3-003 retained_intron Mus_musculus 0 189
ENSMUST00000163246 Slc25a3-005 nonsense_mediated_decay Mus_musculus 3e-36 156

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