C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547809 APPL2-003 ENSG00000136044 9606 - 12:105177110-105233154 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLungOvaryENST00000547809
Transcript ID Colon Heart Lung Ovary
ENST00000547809 3.786±0.00 0.397±0.00 2.702±0.00 3.830±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G8 CIL_0004G8_0001 CGP 12:105107324-105236238
CIL_0004G6 CIL_0004G6_0001 CGP 12:105173296-105396097

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020500 Appl2-001 protein_coding Mus_musculus 0 1818
ENSMUST00000147582 Appl2-002 retained_intron Mus_musculus 0 1131
ENSMUST00000150351 Appl2-012 retained_intron Mus_musculus 0 634
ENSMUST00000146876 Appl2-014 protein_coding Mus_musculus 0 621
ENSMUST00000148096 Appl2-010 retained_intron Mus_musculus 0 558
ENSMUST00000130285 Appl2-009 retained_intron Mus_musculus 0 558
ENSMUST00000176675 Appl2-013 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000150685 Appl2-005 nonsense_mediated_decay Mus_musculus 0 289
ENSMUST00000176294 Appl2-003 protein_coding Mus_musculus 9e-26 122

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