C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020500 Appl2-001 ENSMUSG00000020263 10090 - 10:83600033-83648738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020500 3.552±1.50 13.475±4.96 6.750±0.54 5.089±3.33 3.131±1.15 12.184±1.77 5.033±1.44 4.873±0.76 2.064±1.06 8.481±1.46 4.960±0.44 8.124±6.39 5.746±2.81 5.420±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G8 CIL_0004G8_0002 CGP 10:83543941-83648738
CIL_0004G6 CIL_0004G6_0002 CGP 10:83600033-83762761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0007049 IEA cell cycle
GO:0008283 ISS cell proliferation
GO:0010008 ISS endosome membrane
GO:0016581 ISS NuRD complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258530 APPL2-001 protein_coding Homo_sapiens 0 2521
ENST00000539978 APPL2-002 protein_coding Homo_sapiens 0 2381
ENST00000547439 APPL2-005 nonsense_mediated_decay Homo_sapiens 0 2483
ENST00000547790 APPL2-015 retained_intron Homo_sapiens 0 619
ENST00000547809 APPL2-003 retained_intron Homo_sapiens 0 1818
ENST00000548425 APPL2-014 retained_intron Homo_sapiens 0 479
ENST00000549056 APPL2-007 protein_coding Homo_sapiens 0 320
ENST00000551662 APPL2-004 protein_coding Homo_sapiens 0 2314
ENST00000552945 APPL2-012 processed_transcript Homo_sapiens 6e-36 154
ENST00000553097 APPL2-006 protein_coding Homo_sapiens 1e-19 100
ENST00000553109 APPL2-013 protein_coding Homo_sapiens 0 608

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