C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548397 RP11-43D4.2-001 ENSG00000258111 9606 + 12:104514029-104514439 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyENST00000548397
Transcript ID Adrenal Breast Colon Kidney
ENST00000548397 0.338±0.00 0.051±0.00 0.046±0.00 1.748±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TA CIL_0002TA_0001 CGP 12:104455295-104958744

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178611 Atp5g1-201 protein_coding Mus_musculus 0 444
ENSMUST00000107684 Atp5g1-002 protein_coding Mus_musculus 0 444
ENSMUST00000107686 Atp5g1-003 protein_coding Mus_musculus 0 444
ENSMUST00000090541 Atp5g1-001 protein_coding Mus_musculus 0 444
ENSMUST00000081241 Gm10039-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000131499 Gm4660-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000170777 Gm6612-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000117586 Gm14299-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000117052 Gm14050-001 processed_pseudogene Mus_musculus 1e-28 130

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