C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TGFB-induced factor homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549546 TGIF1-017 ENSG00000177426 9606 + 18:3451724-3457918 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungMuscleOvaryPlacentaTestisENST00000549546
Transcript ID Bladder Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENST00000549546 2.130±0.00 1.198±0.08 6.260±0.00 4.746±0.00 3.536±0.00 3.706±2.67 10.314±1.71 12.123±1.25 5.395±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172229 Tgif1-201 protein_coding Mus_musculus 0 909
ENSMUST00000118283 Tgif1-003 protein_coding Mus_musculus 0 907
ENSMUST00000166395 Tgif1-002 protein_coding Mus_musculus 0 907
ENSMUST00000059775 Tgif1-001 protein_coding Mus_musculus 0 907
ENSMUST00000127719 Tgif1-004 protein_coding Mus_musculus 0 893
ENSMUST00000186358 Tgif1-011 protein_coding Mus_musculus 0 604
ENSMUST00000135007 Tgif1-009 protein_coding Mus_musculus 0 601
ENSMUST00000156484 Tgif1-008 protein_coding Mus_musculus 0 459

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