C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CHURC1-FNTB readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549987 CHURC1-FNTB-001 ENSG00000125954 9606 + 14:64914493-65061361 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000549987
Transcript ID Muscle
ENST00000549987 5.277±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005965 IEA protein farnesyltransferase complex
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0018343 IEA protein farnesylation
GO:0042127 IEA regulation of cell proliferation
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137826 Fntb-002 protein_coding Mus_musculus 0 1877
ENSMUST00000041008 Fntb-001 protein_coding Mus_musculus 0 1546
ENSMUST00000125842 Fntb-007 nonsense_mediated_decay Mus_musculus 0 1541
ENSMUST00000154743 Fntb-004 processed_transcript Mus_musculus 0 621
ENSMUST00000123887 Fntb-003 processed_transcript Mus_musculus 0 451
ENSMUST00000041262 Churc1-001 protein_coding Mus_musculus 0 339
ENSMUST00000152917 Churc1-003 retained_intron Mus_musculus 0 291
ENSMUST00000130605 Fntb-006 retained_intron Mus_musculus 0 244
ENSMUST00000110399 Churc1-002 protein_coding Mus_musculus 0 235
ENSMUST00000136939 Fntb-005 processed_transcript Mus_musculus 8.40779e-45 185

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