C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: farnesyltransferase, CAAX box, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137826 Fntb-002 ENSMUSG00000033373 10090 + 12:76765598-76920231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastOvaryPlacentaTestisENSMUST00000137826
Transcript ID Adrenal Brain Breast Ovary Placenta Testis
ENSMUST00000137826 9.399±0.86 4.411±0.00 6.418±0.79 11.228±3.29 5.314±0.00 1.704±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004311 IMP farnesyltranstransferase activity
GO:0005965 IEA protein farnesyltransferase complex
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0008285 IMP negative regulation of cell proliferation
GO:0018343 IEA protein farnesylation
GO:0042060 IMP wound healing
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0048146 IMP positive regulation of fibroblast proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246166 FNTB-001 protein_coding Homo_sapiens 0 1546
ENST00000359118 CHURC1-201 protein_coding Homo_sapiens 0 329
ENST00000547625 CHURC1-006 protein_coding Homo_sapiens 0 272
ENST00000548752 CHURC1-004 protein_coding Homo_sapiens 0 235
ENST00000549115 CHURC1-002 protein_coding Homo_sapiens 0 339
ENST00000549987 CHURC1-FNTB-001 protein_coding Homo_sapiens 0 1877
ENST00000551093 CHURC1-005 protein_coding Homo_sapiens 0 342
ENST00000551823 CHURC1-FNTB-003 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000551947 CHURC1-003 protein_coding Homo_sapiens 0 235
ENST00000552002 CHURC1-011 protein_coding Homo_sapiens 0 339
ENST00000552941 CHURC1-FNTB-002 nonsense_mediated_decay Homo_sapiens 0 1541
ENST00000553743 CHURC1-FNTB-004 protein_coding Homo_sapiens 3e-31 137
ENST00000554210 FNTB-004 retained_intron Homo_sapiens 0 536
ENST00000554334 FNTB-002 retained_intron Homo_sapiens 0 915
ENST00000555372 FNTB-006 processed_transcript Homo_sapiens 0 353
ENST00000555618 FNTB-007 retained_intron Homo_sapiens 0 287
ENST00000555742 FNTB-003 processed_transcript Homo_sapiens 0 531
ENST00000556089 CHURC1-007 retained_intron Homo_sapiens 0 235
ENST00000556709 FNTB-005 processed_transcript Homo_sapiens 0 268
ENST00000557300 FNTB-008 retained_intron Homo_sapiens 0 446
ENST00000607599 CHURC1-001 protein_coding Homo_sapiens 0 329

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