C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: two pore segment channel 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550785 TPCN1-002 ENSG00000186815 9606 + 12:113221460-113298585 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverOvaryPlacentaTestisENST00000550785
Transcript ID Breast Colon Liver Ovary Placenta Testis
ENST00000550785 0.976±0.00 1.919±0.00 0.876±0.00 1.669±1.18 1.908±0.00 3.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078D CIL_00078D_0002 CGP 12:113195441-113298585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 IEA:IBA voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005886 IBA plasma membrane
GO:0006811 IEA ion transport
GO:0006816 IBA calcium ion transport
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 IBA ion transmembrane transport
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042802 IPI identical protein binding
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport
GO:0072345 IDA NAADP-sensitive calcium-release channel activity
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046426 Tpcn1-201 protein_coding Mus_musculus 0 2867

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