C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551685 RP11-73B8.2-001 ENSG00000257813 9606 - 12:43569769-43572038 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastMuscleTestisENST00000551685
Transcript ID Brain Breast Muscle Testis
ENST00000551685 0.005±0.00 0.010±0.01 0.004±0.00 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033009 Prkrir-001 protein_coding Mus_musculus 0 2178
ENSMUST00000153566 Prkrir-004 nonsense_mediated_decay Mus_musculus 0 481
ENSMUST00000126356 Prkrir-002 nonsense_mediated_decay Mus_musculus 0 364
ENSMUST00000146473 Prkrir-003 processed_transcript Mus_musculus 0 305

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