C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552169 SETP7-001 ENSG00000257444 9606 + 12:107271394-107271846 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLungMuscleOvaryENST00000552169
Transcript ID Adipose Adrenal Brain Colon Lung Muscle Ovary
ENST00000552169 0.025±0.00 0.083±0.00 0.025±0.00 0.049±0.00 0.027±0.00 0.024±0.00 0.048±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 555
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 555
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 555
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 438
ENSMUST00000147590 Set-007 processed_transcript Mus_musculus 0 398
ENSMUST00000120309 Gm14746-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 303
ENSMUST00000190284 RP24-492P7.1-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000120258 Gm16420-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 2e-37 159

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