C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552545 RP11-641A6.5-001 ENSG00000257616 9606 + 12:52730425-52732865 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyOvaryPlacentaTestisENST00000552545
Transcript ID Adrenal Brain Colon Heart Kidney Ovary Placenta Testis
ENST00000552545 0.007±0.00 0.007±0.00 0.006±0.00 0.007±0.00 0.007±0.00 0.007±0.00 0.007±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000M CGP 12:52689626-52777345

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003450 Ddx23-001 protein_coding Mus_musculus 0 2636
ENSMUST00000160506 Ddx23-002 retained_intron Mus_musculus 0 1354
ENSMUST00000159423 Ddx23-003 retained_intron Mus_musculus 0 809
ENSMUST00000161030 Ddx23-004 retained_intron Mus_musculus 0 372

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