C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(rC) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552819 PCBP2-003 ENSG00000197111 9606 + 12:53454734-53479824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungMuscleOvaryPlacentaENST00000552819
Transcript ID Colon Lung Muscle Ovary Placenta
ENST00000552819 27.752±0.00 86.937±0.00 12.305±0.00 147.605±13.45 76.026±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_00033G CIL_00033G_0002 CGP 12:53452102-53500063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108838 Pcbp2-203 protein_coding Mus_musculus 0 1190
ENSMUST00000078404 Pcbp2-202 protein_coding Mus_musculus 0 1140
ENSMUST00000077037 Pcbp2-201 protein_coding Mus_musculus 0 985
ENSMUST00000119050 Gm12186-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000023812 Map3k12-002 protein_coding Mus_musculus 0 545
ENSMUST00000171565 Map3k12-003 protein_coding Mus_musculus 0 224

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