C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | forkhead box N3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554005  |
FOXN3-016 |
ENSG00000053254 |
9606 | - |
14:89280950-89412035  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004KI | CIL_0004KI_0001 | CGP | 14:88824153-89619149 |
| CIL_0008PB | CIL_0008PB_0001 | VISTA | 14:89047550-89650536 |
| CIL_0008OO | CIL_0008OO_0001 | VISTA | 14:89048358-89650633 |
| CIL_0005C7 | CIL_0005C7_0001 | CGP | 14:89124871-89954777 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000085108
|
Foxn3-201 | protein_coding | Mus_musculus | 0 | 302 |
|
ENSMUST00000177451
|
Foxn3-005 | protein_coding | Mus_musculus | 0 | 302 |
|
ENSMUST00000046859
|
Foxn3-001 | protein_coding | Mus_musculus | 0 | 302 |
|
ENSMUST00000120916
|
Gm6783-001 | processed_pseudogene | Mus_musculus | 0 | 267 |
|
ENSMUST00000177269
|
Foxn3-007 | protein_coding | Mus_musculus | 0 | 209 |
|
ENSMUST00000177287
|
Foxn3-006 | retained_intron | Mus_musculus | 1e-38 | 163 |
|
ENSMUST00000176311
|
Foxn3-003 | processed_transcript | Mus_musculus | 4e-33 | 145 |
